Reference
List of the articles published in Bioinformatics and BMC Bioinformatics on new methods of classification for microarray data
H. H. Zhang, J. Ahn, X. Lin, C. Park.
Gene selection using support vector machines with non-convex penalty. [My Copy] Bioinformatics, Vol. 22, No. 1. (1 January 2006), pp. 88-95.R. Díaz-Uriarte, S. Alvarez de Andrés
Gene selection and classification of microarray data using random forest. [My Copy] BMC Bioinformatics, Vol. 7 (2006) E K. Tang, P N. Suganthan, X Yao. Gene selection algorithms for microarray data based on least squares support vector machine. [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006).
X. Zhang, X. Lu, Q. Shi, et al. Recursive SVM feature selection and sample classification for mass-spectrometry and microarray data. [My Copy] BMC Bioinformatics, Vol. 7 (2006)Satoshi Niijima, Satoru Kuhara. Recursive gene selection based on maximum margin criterion: a comparison with SVM-RFE. BMC Bioinformatics, Vol. 7 (2006), 543. [My Copy] Chad A A. Davis, Fabian Gerick, Volker Hintermair, et al. Reliable gene signatures for microarray classification: assessment of stability and performance. [My Copy] Bioinformatics (2006)
R. Shen, D. Ghosh, A. Chinnaiyan, Z. Meng Eigengene-based linear discriminant model for tumor classification using gene expression microarray data. [My Copy] Bioinformatics, Vol. 22, No. 21. (2006), pp. 2635-2642.
D. Wang, Y. Lv, Z. Guo, et al. Effects of replacing the unreliable cDNA microarray measurements on the disease classification based on gene expression profiles and functional modules. [My Copy] Bioinformatics, Vol. 22, No. 23. (1 December 2006), pp. 2883-2889.
F. Martella Classification of microarray data with factor mixture models. [My Copy] Bioinformatics, Vol. 22, No. 2. (15 January 2006), pp. 202-208.
Yijun Sun, Steve Goodison, Jian Li>, Li Liu, William Farmerie. Improved breast cancer prognosis through the combination of clinical and genetic markers . Bioinformatics, Vol. 23, No. 1. (1 January 2007), pp. 30-37.
Li Wang, Ji Zhu, Hui ZouHybrid Huberized Support Vector Machines for Microarray Classification and Gene Selection. Bioinformatics (5 January 2008)Monica Nicolau, Robert Tibshirani, Anne-Lise L. Børresen-Dale, Stefanie S S. Jeffrey. Disease-Specific Genomic Analysis: Identifying the Signature of Pathologic Biology. Bioinformatics 2007 23(8):957-965
Sijian Wang, Ji Zhu. Improved Centroids Estimation for the Nearest Shrunken Centroid Classifier. Bioinformatics 2007 23(8):972-979
X. Zhou, D. P. Tuck. MSVM-RFE: extensions of SVM-RFE for multiclass gene selection on DNA microarray data. [My Copy]Bioinformatics, Vol. 23, No. 9. (1 May 2007), pp. 1106-1114. Zhipeng Cai, Randy Goebel, Mohammad R. Salavatipour, Guohui Lin. Selecting dissimilar genes for multi-class classification, an application in cancer subtyping. BMC Bioinformatics, Vol. 8 (16 June 2007), 206. [My Copy]
R. Díaz-Uriarte, S. Alvarez de Andrés. Gene selection and classification of microarray data using random forest. [My Copy]BMC Bioinformatics, Vol. 7 (2006)
Michael Gormley, William Dampier, Adam Ertel, Bilge Karacali, Aydin Tozeren. Prediction potential of candidate biomarker sets identified and validated on gene expression data from multiple datasets>. BMC Bioinformatics, Vol. 8 (26 October 2007), 415. [My Copy]
F. Tai, W. Pan. Incorporating prior knowledge of predictors into penalized classifiers with multiple penalty terms.> [My Copy] Bioinformatics, Vol. 23, No. 14. (15 July 2007), pp. 1775-1782. J G G. Liao, Khew-Voon V. Chin. Logistic regression for disease classification using microarray data: model selection in a large p and small n case. [My Copy] Bioinformatics (31 May 2007)
H M M. Bøvelstad, S Nygård, H L L. Størvold. Predicting survival from microarray data - a comparative study. [My Copy] Bioinformatics (6 June 2007)
Chih H. Jen, Tsun P. Yang, Chien Y. Tung, et al.
Signature Evaluation Tool (SET): a Java-based tool to evaluate and visualize the sample discrimination abilities of gene expression signatures. BMC Bioinformatics, Vol. 9, No. 1. (2008) [My Copy]Xiaoyan Leng and Hans-Georg Müller. Classification using functional data analysis for temporal gene expression data. Bioinformatics 2006 22(1):68-76
De-Shuang Huang and Chun-Hou Zheng. Independent component analysis-based penalized discriminant method for tumor classification using gene expression data. Bioinformatics 2006 22(15):1855-1862.
Gavin C. Cawley and Nicola L.C. Talbot . Gene selection in cancer classification using sparse logistic regression with Bayesian regularization. Bioinformatics 2006 22(19):2348-2355.nt>
